Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GHSR-202ENST00000427970 912 ntBASIC14.62□□□□□ -0.07
AP4S1Q9Y587 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 HNRNPUP1-201ENST00000554987 333 ntBASIC14.62□□□□□ -0.07
AP4S1Q9Y587 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.62□□□□□ -0.07
AP4S1Q9Y587 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP4S1Q9Y587 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SPTSSB-204ENST00000617024 1292 ntBASIC14.61□□□□□ -0.07
AP4S1Q9Y587 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 AP002414.3-201ENST00000589352 1468 ntBASIC14.61□□□□□ -0.07
AP4S1Q9Y587 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP4S1Q9Y587 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 EEF1DP4-201ENST00000446006 880 ntBASIC14.6□□□□□ -0.07
AP4S1Q9Y587 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 MIR4751-201ENST00000578027 74 ntBASIC14.6□□□□□ -0.07
AP4S1Q9Y587 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms