Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RCL1Q9Y2P8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 KRT8P37-201ENST00000451609 1420 ntBASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 FAM210CP-201ENST00000445714 574 ntBASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AC091304.2-201ENST00000564639 760 ntBASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AC117500.6-201ENST00000624871 588 ntBASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AC152010.1-201ENST00000415779 2006 ntBASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AP000845.1-201ENST00000581677 2131 ntBASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RCL1Q9Y2P8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RCL1Q9Y2P8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.65□□□□□ -0.39
RCL1Q9Y2P8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.65□□□□□ -0.39
RCL1Q9Y2P8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 AC084364.1-201ENST00000551967 1556 ntBASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 AC140658.5-201ENST00000438532 169 ntBASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.64□□□□□ -0.39
RCL1Q9Y2P8 AC098859.1-201ENST00000502915 1238 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms