Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AC002472.2-201ENST00000442739 958 ntBASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 RPL13AP25-201ENST00000484130 612 ntBASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AC104596.2-201ENST00000512793 793 ntBASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AC026410.3-201ENST00000514280 936 ntBASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 MIR4745-201ENST00000577608 62 ntBASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 BRI3BPP1-201ENST00000594224 787 ntBASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4E1Q9UPM8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 AC004066.1-201ENST00000502488 802 ntBASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 AC123567.1-201ENST00000548294 1261 ntBASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 AL391825.1-201ENST00000457671 1364 ntBASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4E1Q9UPM8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 REXO1L2P-201ENST00000425429 2069 ntBASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 INTS4P2-202ENST00000614726 2019 ntBASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms