Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AL157414.3-201ENST00000624276 1954 ntBASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 CRB3P1-201ENST00000449338 276 ntBASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 AC092364.2-202ENST00000597012 1073 ntBASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 WFDC1-204ENST00000613603 549 ntBASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC3Q9UN70 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AL139094.1-201ENST00000405549 1188 ntBASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 FGD5P1-202ENST00000614866 2498 ntBASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGC3Q9UN70 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 REXO1L5P-201ENST00000622260 2098 ntBASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms