Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 MIR769-201ENST00000390225 118 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AC005730.2-201ENST00000564549 1184 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AC138627.1-207ENST00000641560 1006 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 LINC02199-201ENST00000506655 2702 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 TUBBP5-203ENST00000508529 1334 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 PRAL-201ENST00000624952 3286 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 UPF3AP2-201ENST00000457924 1132 ntBASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AC005740.2-201ENST00000511085 419 ntBASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 AL157414.3-201ENST00000624276 1954 ntBASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC10Q9NYD6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 ELK2AP-201ENST00000392510 1007 ntBASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 CYP46A4P-201ENST00000414953 267 ntBASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 GHSR-202ENST00000427970 912 ntBASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 AC022748.3-201ENST00000621828 275 ntBASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC10Q9NYD6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms