Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AC010327.5-201ENST00000586923 3061 ntBASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AL627223.1-201ENST00000416693 442 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC002472.2-201ENST00000442739 958 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 TSPY16P-201ENST00000449843 468 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC112191.1-201ENST00000523689 701 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC015911.4-201ENST00000588022 1070 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC009093.7-201ENST00000623853 1223 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 OR2I1P-209ENST00000641730 5365 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC097359.2-201ENST00000604992 2389 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 MTHFR-210ENST00000641407 2387 ntBASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCM2LQ9NUG4 AC113367.3-201ENST00000508316 1912 ntBASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AC055876.3-201ENST00000431496 288 ntBASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AC005237.2-201ENST00000434368 219 ntBASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 PHKG1P2-201ENST00000457537 863 ntBASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AC024267.1-201ENST00000582320 895 ntBASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AC138649.4-201ENST00000612222 287 ntBASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.72□□□□□ -0.05
CCM2LQ9NUG4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms