Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 AC125807.2-201ENST00000513358 3514 ntBASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDC42SE1Q9NRR8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 TNKS-213ENST00000522110 2900 ntBASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDC42SE1Q9NRR8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AL359510.2-201ENST00000624958 2249 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 KRT17P1-201ENST00000399211 1546 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 CYP51A1P1-201ENST00000492267 1507 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 POU5F1P3-201ENST00000428824 1078 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms