Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AC004870.1-201ENST00000315132 882 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 FAAHP1-202ENST00000446499 1238 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AC079781.3-201ENST00000449110 356 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AC108073.2-201ENST00000464002 357 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 RN7SL510P-201ENST00000581311 263 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AC148477.8-201ENST00000624298 468 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 FAM215A-202ENST00000632077 792 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 Z82170.1-201ENST00000625081 3192 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 AL139385.1-201ENST00000611744 3272 ntBASIC14.09□□□□□ -0.15
HMG20AQ9NP66 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMG20AQ9NP66 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMG20AQ9NP66 WASH6P-202ENST00000359512 1437 ntBASIC14.08□□□□□ -0.15
HMG20AQ9NP66 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 AC004790.2-201ENST00000623588 572 ntBASIC14.08□□□□□ -0.16
HMG20AQ9NP66 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms