Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRTM1Q9HBL6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 HLA-J-203ENST00000494367 1087 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AC109322.1-201ENST00000524499 1264 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 LINC02084-201ENST00000606069 1096 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AL596442.2-201ENST00000610240 980 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AL138828.2-201ENST00000615812 383 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 AL121723.1-201ENST00000445194 1519 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 CICP14-201ENST00000629111 2732 ntBASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRTM1Q9HBL6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AC012508.2-201ENST00000567613 1472 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 TOMM22P5-201ENST00000416399 439 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 HMGN1P19-201ENST00000436976 333 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CNN2P2-201ENST00000443536 909 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CNN2P3-201ENST00000450201 906 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms