Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.77■□□□□ 0.12
CDCA3Q99618 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.77■□□□□ 0.12
CDCA3Q99618 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.77■□□□□ 0.12
CDCA3Q99618 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDCA3Q99618 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.77■□□□□ 0.12
CDCA3Q99618 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.77■□□□□ 0.12
CDCA3Q99618 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.77■□□□□ 0.12
CDCA3Q99618 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CDCA3Q99618 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.77■□□□□ 0.12
CDCA3Q99618 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.77■□□□□ 0.12
CDCA3Q99618 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.77■□□□□ 0.12
CDCA3Q99618 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.77■□□□□ 0.12
CDCA3Q99618 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDCA3Q99618 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDCA3Q99618 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.77■□□□□ 0.12
CDCA3Q99618 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.77■□□□□ 0.12
CDCA3Q99618 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.77■□□□□ 0.12
CDCA3Q99618 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDCA3Q99618 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDCA3Q99618 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.11
CDCA3Q99618 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 AC011840.2-201ENST00000563063 1520 ntBASIC15.77■□□□□ 0.11
CDCA3Q99618 AC112504.1-201ENST00000623415 1841 ntBASIC15.77■□□□□ 0.11
CDCA3Q99618 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.77■□□□□ 0.11
CDCA3Q99618 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDCA3Q99618 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
CDCA3Q99618 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC022211.2-201ENST00000585075 2527 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC006058.4-201ENST00000624016 1670 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 FAM90A2P-201ENST00000511144 1395 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 FAM90A25P-201ENST00000528404 1395 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.76■□□□□ 0.11
CDCA3Q99618 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.76■□□□□ 0.11
CDCA3Q99618 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC078991.1-201ENST00000437297 610 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 RPL7P35-201ENST00000446943 740 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.76■□□□□ 0.11
CDCA3Q99618 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.76■□□□□ 0.11
CDCA3Q99618 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC087045.2-201ENST00000606279 1003 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 AC092171.5-201ENST00000608012 942 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.76■□□□□ 0.11
CDCA3Q99618 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC244394.1-201ENST00000435000 1665 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC012313.1-201ENST00000593393 3059 ntBASIC15.76■□□□□ 0.11
CDCA3Q99618 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDCA3Q99618 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDCA3Q99618 AC009093.2-202ENST00000620513 2079 ntBASIC15.75■□□□□ 0.11
CDCA3Q99618 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.75■□□□□ 0.11
CDCA3Q99618 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.75■□□□□ 0.11
CDCA3Q99618 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.75■□□□□ 0.11
CDCA3Q99618 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDCA3Q99618 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDCA3Q99618 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.75■□□□□ 0.11
CDCA3Q99618 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDCA3Q99618 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDCA3Q99618 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms