Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 MRPL20P1-201ENST00000400819 433 ntBASIC11.74□□□□□ -0.53
AP1S3Q96PC3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AP002469.2-201ENST00000531724 424 ntBASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 MIR4515-201ENST00000584082 81 ntBASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 LINC01711-201ENST00000598340 967 ntBASIC11.74□□□□□ -0.53
AP1S3Q96PC3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AP001282.1-201ENST00000531301 1499 ntBASIC11.74□□□□□ -0.53
AP1S3Q96PC3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
AP1S3Q96PC3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.73□□□□□ -0.53
AP1S3Q96PC3 BEND3P1-201ENST00000421591 1944 ntBASIC11.73□□□□□ -0.53
AP1S3Q96PC3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AC093458.2-201ENST00000623150 629 ntBASIC11.73□□□□□ -0.53
AP1S3Q96PC3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms