Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 AC134684.3-201ENST00000641758 218 ntBASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
FOXRED1Q96CU9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 GHSR-202ENST00000427970 912 ntBASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 IGHV3-62-201ENST00000520057 340 ntBASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 AC026120.1-201ENST00000611536 926 ntBASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 REXO1L2P-201ENST00000425429 2069 ntBASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
FOXRED1Q96CU9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 ACE3P-201ENST00000423435 1973 ntBASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 FO393414.2-201ENST00000405153 598 ntBASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 ADH5P3-201ENST00000433842 1137 ntBASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 TIMM8BP1-201ENST00000452384 211 ntBASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.46□□□□□ -0.25
FOXRED1Q96CU9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms