Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.83□□□□□ -0.04
UBE2E3Q969T4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2E3Q969T4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBE2E3Q969T4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SPDYE19P-201ENST00000338590 713 ntBASIC14.82□□□□□ -0.04
UBE2E3Q969T4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 MIR770-201ENST00000390219 98 ntBASIC14.82□□□□□ -0.04
UBE2E3Q969T4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 AL589987.1-201ENST00000453380 819 ntBASIC14.82□□□□□ -0.04
UBE2E3Q969T4 RN7SL399P-201ENST00000471648 279 ntBASIC14.82□□□□□ -0.04
UBE2E3Q969T4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 LINC00554-201ENST00000564841 3011 ntBASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 CLK3P2-201ENST00000427566 1453 ntBASIC14.82□□□□□ -0.04
UBE2E3Q969T4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBE2E3Q969T4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 MST1L-201ENST00000442552 2185 ntBASIC14.81□□□□□ -0.04
UBE2E3Q969T4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC104596.2-201ENST00000512793 793 ntBASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC055876.2-201ENST00000531834 546 ntBASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC099568.2-201ENST00000609194 695 ntBASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AJ011932.1-201ENST00000621707 465 ntBASIC14.81□□□□□ -0.04
UBE2E3Q969T4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBE2E3Q969T4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms