Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 TMBIM7P-203ENST00000641617 1718 ntBASIC14.6□□□□□ -0.07
TM9SF4Q92544 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ENPP7P5-201ENST00000541031 1031 ntBASIC14.59□□□□□ -0.07
TM9SF4Q92544 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 CICP24-201ENST00000605464 2705 ntBASIC14.59□□□□□ -0.07
TM9SF4Q92544 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 AC138035.3-201ENST00000622706 2791 ntBASIC14.59□□□□□ -0.07
TM9SF4Q92544 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.59□□□□□ -0.07
TM9SF4Q92544 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TM9SF4Q92544 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF4Q92544 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF4Q92544 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF4Q92544 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TM9SF4Q92544 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF4Q92544 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TM9SF4Q92544 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
TM9SF4Q92544 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 FAM86LP-201ENST00000478302 853 ntBASIC14.58□□□□□ -0.08
TM9SF4Q92544 AC092658.1-201ENST00000505836 891 ntBASIC14.58□□□□□ -0.08
TM9SF4Q92544 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TM9SF4Q92544 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 LINC01115-203ENST00000606068 577 ntBASIC14.58□□□□□ -0.08
TM9SF4Q92544 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TM9SF4Q92544 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms