Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC23.05■■□□□ 1.28
CCER1Q8TC90 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 C1R-202ENST00000536053 2347 ntTSL 2 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 AP000344.2-201ENST00000512987 629 ntBASIC23.04■■□□□ 1.28
CCER1Q8TC90 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 AL589739.1-201ENST00000607720 493 ntBASIC23.04■■□□□ 1.28
CCER1Q8TC90 AC009093.7-201ENST00000623853 1223 ntBASIC23.04■■□□□ 1.28
CCER1Q8TC90 AF228730.6-201ENST00000641497 218 ntBASIC23.04■■□□□ 1.28
CCER1Q8TC90 AC084121.3-201ENST00000641716 218 ntBASIC23.04■■□□□ 1.28
CCER1Q8TC90 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 AC018529.2-202ENST00000611482 3087 ntBASIC23.04■■□□□ 1.28
CCER1Q8TC90 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC23.04■■□□□ 1.28
CCER1Q8TC90 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCER1Q8TC90 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 DEK-201ENST00000244776 1441 ntTSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 RPL30-202ENST00000396070 440 ntTSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AP000347.1-202ENST00000435868 847 ntBASIC23.03■■□□□ 1.28
CCER1Q8TC90 AC112482.1-201ENST00000492080 688 ntBASIC23.03■■□□□ 1.28
CCER1Q8TC90 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AC010327.4-202ENST00000591484 748 ntBASIC23.03■■□□□ 1.28
CCER1Q8TC90 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCER1Q8TC90 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.03■■□□□ 1.28
CCER1Q8TC90 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 TNN-203ENST00000622870 3719 ntTSL 5 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 AL080243.2-201ENST00000418783 582 ntBASIC23.02■■□□□ 1.28
CCER1Q8TC90 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 LINC00628-201ENST00000628516 1289 ntBASIC23.02■■□□□ 1.28
CCER1Q8TC90 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms