Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AC104794.3-201ENST00000566840 1248 ntBASIC14.43□□□□□ -0.1
NUP43Q8NFH3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AP000845.1-201ENST00000581677 2131 ntBASIC14.43□□□□□ -0.1
NUP43Q8NFH3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AC011467.4-201ENST00000594891 528 ntBASIC14.43□□□□□ -0.1
NUP43Q8NFH3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CLK3P2-201ENST00000427566 1453 ntBASIC14.43□□□□□ -0.1
NUP43Q8NFH3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NUP43Q8NFH3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 AL391069.4-201ENST00000609583 481 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 AC012508.2-201ENST00000567613 1472 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NUP43Q8NFH3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.42□□□□□ -0.1
NUP43Q8NFH3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms