Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AL353779.1-201ENST00000434793 351 ntBASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 UGT1A2P-201ENST00000454886 866 ntBASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SRFBP1Q8NEF9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 AC004066.1-201ENST00000502488 802 ntBASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 SERBP1P5-201ENST00000510079 1181 ntBASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 LINC02560-201ENST00000596379 459 ntBASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 AC093726.1-201ENST00000608064 963 ntBASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 AC008761.3-201ENST00000624803 892 ntBASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 AC023024.2-201ENST00000623561 1993 ntBASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SRFBP1Q8NEF9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 AC006058.4-201ENST00000624016 1670 ntBASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRFBP1Q8NEF9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms