Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 TOMM22P5-201ENST00000416399 439 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 RNA5SP421-201ENST00000516864 134 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AC084364.1-201ENST00000551967 1556 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 AC063926.2-201ENST00000623766 1308 ntBASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.58□□□□□ -0.08
SIMC1Q8NDZ2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 SERBP1P5-201ENST00000510079 1181 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AC023310.3-201ENST00000557027 670 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AC100756.1-201ENST00000562736 682 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AC138749.3-201ENST00000567691 622 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AL391069.4-201ENST00000609583 481 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AC116165.1-201ENST00000611806 668 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AL158212.4-201ENST00000624062 1286 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 CLK3P2-201ENST00000427566 1453 ntBASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIMC1Q8NDZ2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.56□□□□□ -0.08
SIMC1Q8NDZ2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms