Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 AC007551.1-201ENST00000457394 519 ntBASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 MIR6775-201ENST00000617557 69 ntBASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 AL603764.1-201ENST00000636452 321 ntBASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ARHGEF39Q8N4T4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AC016694.1-201ENST00000434179 700 ntBASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 RPL7P3-201ENST00000441388 714 ntBASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 IGHV3-71-201ENST00000523324 359 ntBASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AC132938.4-201ENST00000623835 848 ntBASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ARHGEF39Q8N4T4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms