Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 RPL7P3-201ENST00000441388 714 ntBASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 BNIP3P42-201ENST00000454982 569 ntBASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 BNIP3P29-201ENST00000598302 571 ntBASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC011447.5-201ENST00000616168 564 ntBASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCN4BQ8IWT1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SCN4BQ8IWT1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCN4BQ8IWT1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AL158070.2-201ENST00000623713 1621 ntBASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 NUS1P3-201ENST00000423502 862 ntBASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 SAMD11P1-201ENST00000571429 661 ntBASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 GNRHR2-203ENST00000581100 1187 ntBASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 CICP11-201ENST00000434745 2827 ntBASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 AC087481.3-201ENST00000602886 1894 ntBASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCN4BQ8IWT1 LRRC59-203ENST00000576448 1531 ntBASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 240.1 ms