Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APLFQ8IW19 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APLFQ8IW19 CICP17-201ENST00000418553 2377 ntBASIC15.4■□□□□ 0.06
APLFQ8IW19 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APLFQ8IW19 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APLFQ8IW19 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APLFQ8IW19 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.4■□□□□ 0.06
APLFQ8IW19 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
APLFQ8IW19 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
APLFQ8IW19 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
APLFQ8IW19 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 AL035456.1-201ENST00000456064 1369 ntBASIC15.39■□□□□ 0.05
APLFQ8IW19 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.39■□□□□ 0.05
APLFQ8IW19 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 AC003101.2-201ENST00000612557 442 ntBASIC15.39■□□□□ 0.05
APLFQ8IW19 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
APLFQ8IW19 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
APLFQ8IW19 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
APLFQ8IW19 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
APLFQ8IW19 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APLFQ8IW19 AC027612.1-201ENST00000445234 2395 ntBASIC15.39■□□□□ 0.05
APLFQ8IW19 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 HLA-H-201ENST00000383620 1096 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 NME2P1-201ENST00000426182 414 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.38■□□□□ 0.05
APLFQ8IW19 AL596325.1-201ENST00000563991 1082 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.38■□□□□ 0.05
APLFQ8IW19 AC004233.3-201ENST00000607794 1269 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 AL138828.2-201ENST00000615812 383 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 SPDYE12P-201ENST00000618416 771 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.38■□□□□ 0.05
APLFQ8IW19 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 DGCR9-201ENST00000609630 2415 ntBASIC15.38■□□□□ 0.05
APLFQ8IW19 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.38■□□□□ 0.05
APLFQ8IW19 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
APLFQ8IW19 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms