Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 AC005730.2-201ENST00000564549 1184 ntBASIC16.6■□□□□ 0.25
HERC6Q8IVU3 RN7SL713P-201ENST00000582127 302 ntBASIC16.6■□□□□ 0.25
HERC6Q8IVU3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HERC6Q8IVU3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 AC022217.1-201ENST00000521069 738 ntBASIC16.59■□□□□ 0.25
HERC6Q8IVU3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HERC6Q8IVU3 AC011477.6-201ENST00000604980 1927 ntBASIC16.58■□□□□ 0.25
HERC6Q8IVU3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HERC6Q8IVU3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 MIR648-201ENST00000385046 94 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 AL139094.1-201ENST00000405549 1188 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 AC005740.2-201ENST00000511085 419 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 RN7SL574P-201ENST00000581512 297 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 OR10B1P-201ENST00000601666 907 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 AC073413.1-201ENST00000603927 732 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 AL645939.5-201ENST00000606834 243 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 AC025181.2-201ENST00000606994 802 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 ZACNP1-201ENST00000612259 710 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 MST1L-201ENST00000442552 2185 ntBASIC16.58■□□□□ 0.24
HERC6Q8IVU3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HERC6Q8IVU3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms