Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 FAM8A4P-201ENST00000435433 1213 ntBASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 AC016629.1-201ENST00000596579 586 ntBASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 AC007326.2-201ENST00000624224 7579 ntBASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC149Q6ZUS6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 AL603832.2-201ENST00000566195 2125 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 AC079178.1-201ENST00000420915 656 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 HSPB1P2-201ENST00000448722 546 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 EIF4HP1-201ENST00000453115 687 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 AC126915.1-201ENST00000522847 1038 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 AC138627.1-207ENST00000641560 1006 ntBASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC149Q6ZUS6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 AC018735.1-201ENST00000437208 1502 ntBASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC149Q6ZUS6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms