Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 C8orf49-201ENST00000525043 1968 ntBASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZNF880Q6PDB4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 SPDYE7P-202ENST00000420373 878 ntBASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 AL512356.2-201ENST00000546955 174 ntBASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.95□□□□□ -0.34
ZNF880Q6PDB4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 GRK6P1-201ENST00000400595 1711 ntBASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF880Q6PDB4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms