Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 RPL5P21-201ENST00000404620 815 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 RPL17P11-201ENST00000417593 544 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 HLA-K-203ENST00000430151 1046 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 AC125604.1-201ENST00000496255 707 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 DUX4L47-201ENST00000566374 394 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 AC090164.2-201ENST00000611487 516 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 AC068587.8-201ENST00000641239 219 ntBASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD4Q5XG99 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC068587.6-202ENST00000641839 5619 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC092978.1-202ENST00000637590 1327 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AL353637.1-201ENST00000451571 732 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC090857.1-201ENST00000527400 390 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AL358472.3-201ENST00000608147 415 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AL353770.1-201ENST00000614915 403 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC002472.3-201ENST00000640124 621 ntBASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.94□□□□□ -0.02
LYSMD4Q5XG99 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AD000864.1-201ENST00000624076 2295 ntBASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AC069218.1-201ENST00000435269 762 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms