Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NPM1P28-201ENST00000492269 840 ntBASIC16.28■□□□□ 0.2
VARS2Q5ST30 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC115989.2-201ENST00000578640 563 ntBASIC16.28■□□□□ 0.2
VARS2Q5ST30 RN7SL190P-201ENST00000582519 257 ntBASIC16.28■□□□□ 0.2
VARS2Q5ST30 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC144521.1-201ENST00000607148 956 ntBASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.27■□□□□ 0.2
VARS2Q5ST30 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 AC092850.2-201ENST00000623821 2697 ntBASIC16.27■□□□□ 0.2
VARS2Q5ST30 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 EIF3FP3-201ENST00000434851 1086 ntBASIC16.27■□□□□ 0.2
VARS2Q5ST30 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 FAM86HP-204ENST00000513466 959 ntBASIC16.27■□□□□ 0.2
VARS2Q5ST30 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 ENPP7P14-201ENST00000621765 1040 ntBASIC16.27■□□□□ 0.2
VARS2Q5ST30 AL139099.5-201ENST00000635274 300 ntBASIC16.27■□□□□ 0.2
VARS2Q5ST30 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARS2Q5ST30 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VARS2Q5ST30 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARS2Q5ST30 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
VARS2Q5ST30 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.26■□□□□ 0.19
VARS2Q5ST30 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VARS2Q5ST30 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms