Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
BSXQ3C1V8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.52□□□□□ -0.41
BSXQ3C1V8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.52□□□□□ -0.41
BSXQ3C1V8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.52□□□□□ -0.41
BSXQ3C1V8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.52□□□□□ -0.41
BSXQ3C1V8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
BSXQ3C1V8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BSXQ3C1V8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 AC023024.2-201ENST00000623561 1993 ntBASIC12.51□□□□□ -0.41
BSXQ3C1V8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 KRT18P3-201ENST00000451602 1288 ntBASIC12.51□□□□□ -0.41
BSXQ3C1V8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 AC106730.1-201ENST00000566722 1090 ntBASIC12.51□□□□□ -0.41
BSXQ3C1V8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 AC140113.2-201ENST00000604370 208 ntBASIC12.51□□□□□ -0.41
BSXQ3C1V8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BSXQ3C1V8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
BSXQ3C1V8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BSXQ3C1V8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BSXQ3C1V8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 275.3 ms