Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H1AQ02539 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC112693.3-201ENST00000624819 1983 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AP3S2-216ENST00000617003 1561 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 KRT8P37-201ENST00000451609 1420 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 KRT18P32-201ENST00000424695 1287 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AL353705.2-201ENST00000428243 662 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 DNAJB3-201ENST00000446806 729 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 LINC01225-203ENST00000563550 1244 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 RARRES2P9-201ENST00000565168 469 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC055717.3-201ENST00000622967 595 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 C18orf15-201ENST00000623680 2534 ntBASIC11.88□□□□□ -0.51
HIST1H1AQ02539 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HIST1H1AQ02539 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 AC126365.1-201ENST00000578585 1514 ntBASIC11.87□□□□□ -0.51
HIST1H1AQ02539 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 CR383656.2-201ENST00000548656 2254 ntBASIC11.87□□□□□ -0.51
HIST1H1AQ02539 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.87□□□□□ -0.51
HIST1H1AQ02539 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms