Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC003686.1-201ENST00000550956 1034 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 AL160191.2-201ENST00000603975 601 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 AC007326.1-201ENST00000604539 458 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 AC006986.1-201ENST00000612764 241 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 AC020904.3-201ENST00000624199 442 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 AP000769.1-203ENST00000637245 208 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 XBP1P1-201ENST00000436573 652 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 IGHV1-12-201ENST00000518307 205 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 AC092364.2-201ENST00000596710 2692 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 FAM197Y6-201ENST00000420524 766 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC9.19□□□□□ -0.94
HSPG2P98160 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 ZBTB45P1-201ENST00000452761 1456 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 MARK2P16-201ENST00000605714 1723 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HSPG2P98160 AC114947.1-202ENST00000514136 344 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 AC092299.1-201ENST00000632679 757 ntBASIC9.19□□□□□ -0.94
HSPG2P98160 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HSPG2P98160 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC9.19□□□□□ -0.94
HSPG2P98160 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC9.18□□□□□ -0.94
HSPG2P98160 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC9.18□□□□□ -0.94
HSPG2P98160 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 AL118522.1-201ENST00000611368 560 ntBASIC9.18□□□□□ -0.94
HSPG2P98160 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 AC112504.1-201ENST00000623415 1841 ntBASIC9.18□□□□□ -0.94
HSPG2P98160 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC9.18□□□□□ -0.94
HSPG2P98160 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC9.18□□□□□ -0.94
HSPG2P98160 RPS18P9-201ENST00000482817 460 ntBASIC9.18□□□□□ -0.94
HSPG2P98160 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC9.18□□□□□ -0.94
HSPG2P98160 OR2A1-AS1-210ENST00000496968 531 ntBASIC9.18□□□□□ -0.94
HSPG2P98160 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC9.18□□□□□ -0.94
HSPG2P98160 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.18□□□□□ -0.94
HSPG2P98160 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HSPG2P98160 AL360270.3-201ENST00000609118 1348 ntBASIC9.18□□□□□ -0.94
HSPG2P98160 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms