Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
H3F3AP84243 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.78□□□□□ -0.2
H3F3AP84243 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
H3F3AP84243 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.78□□□□□ -0.2
H3F3AP84243 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3AP84243 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.77□□□□□ -0.2
H3F3AP84243 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3AP84243 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3AP84243 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
H3F3AP84243 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
H3F3AP84243 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
H3F3AP84243 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.77□□□□□ -0.21
H3F3AP84243 DGCR5-201ENST00000399539 862 ntBASIC13.77□□□□□ -0.21
H3F3AP84243 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.77□□□□□ -0.21
H3F3AP84243 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.77□□□□□ -0.21
H3F3AP84243 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
H3F3AP84243 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
H3F3AP84243 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.77□□□□□ -0.21
H3F3AP84243 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.77□□□□□ -0.21
H3F3AP84243 ENPP7P5-201ENST00000541031 1031 ntBASIC13.77□□□□□ -0.21
H3F3AP84243 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.77□□□□□ -0.21
H3F3AP84243 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 KRT8P22-201ENST00000562317 1415 ntBASIC13.77□□□□□ -0.21
H3F3AP84243 SAMD11P1-201ENST00000571429 661 ntBASIC13.77□□□□□ -0.21
H3F3AP84243 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.77□□□□□ -0.21
H3F3AP84243 AC133539.2-201ENST00000604757 467 ntBASIC13.77□□□□□ -0.21
H3F3AP84243 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.77□□□□□ -0.21
H3F3AP84243 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3F3AP84243 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
H3F3AP84243 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H3F3AP84243 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 AC007787.1-201ENST00000588095 1583 ntBASIC13.76□□□□□ -0.21
H3F3AP84243 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H3F3AP84243 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
H3F3AP84243 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 AL645937.2-201ENST00000396808 931 ntBASIC13.76□□□□□ -0.21
H3F3AP84243 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 C1QBPP1-201ENST00000400117 770 ntBASIC13.76□□□□□ -0.21
H3F3AP84243 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.76□□□□□ -0.21
H3F3AP84243 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.76□□□□□ -0.21
H3F3AP84243 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H3F3AP84243 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 WASH4P-201ENST00000564273 1246 ntBASIC13.76□□□□□ -0.21
H3F3AP84243 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.76□□□□□ -0.21
H3F3AP84243 AC027307.3-201ENST00000594262 1100 ntBASIC13.76□□□□□ -0.21
H3F3AP84243 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.76□□□□□ -0.21
H3F3AP84243 WFDC1-204ENST00000613603 549 ntBASIC13.76□□□□□ -0.21
H3F3AP84243 AC025048.6-201ENST00000634326 1161 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms