Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.6□□□□□ -0.07
GABREP78334 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABREP78334 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABREP78334 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABREP78334 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.6□□□□□ -0.07
GABREP78334 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABREP78334 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABREP78334 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GABREP78334 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.59□□□□□ -0.07
GABREP78334 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 AC011477.6-201ENST00000604980 1927 ntBASIC14.59□□□□□ -0.07
GABREP78334 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 NKAIN1P1-201ENST00000435754 582 ntBASIC14.59□□□□□ -0.07
GABREP78334 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.59□□□□□ -0.07
GABREP78334 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 SERPINA13P-202ENST00000478994 924 ntBASIC14.59□□□□□ -0.07
GABREP78334 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
GABREP78334 MIR4722-201ENST00000578292 60 ntBASIC14.59□□□□□ -0.07
GABREP78334 PPY2P-201ENST00000582808 702 ntBASIC14.59□□□□□ -0.07
GABREP78334 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.59□□□□□ -0.07
GABREP78334 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.59□□□□□ -0.07
GABREP78334 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.59□□□□□ -0.07
GABREP78334 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.59□□□□□ -0.07
GABREP78334 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GABREP78334 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
GABREP78334 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GABREP78334 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GABREP78334 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
GABREP78334 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GABREP78334 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
GABREP78334 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
GABREP78334 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.58□□□□□ -0.08
GABREP78334 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.58□□□□□ -0.08
GABREP78334 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABREP78334 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.58□□□□□ -0.08
GABREP78334 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.58□□□□□ -0.08
GABREP78334 Z97180.1-201ENST00000445173 988 ntBASIC14.58□□□□□ -0.08
GABREP78334 SPTLC1P5-201ENST00000450718 252 ntBASIC14.58□□□□□ -0.08
GABREP78334 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.58□□□□□ -0.08
GABREP78334 RN7SL11P-201ENST00000471305 293 ntBASIC14.58□□□□□ -0.08
GABREP78334 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms