Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.65□□□□□ -0.06
SKP1P63208 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.65□□□□□ -0.06
SKP1P63208 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.65□□□□□ -0.06
SKP1P63208 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SKP1P63208 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SKP1P63208 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SKP1P63208 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
SKP1P63208 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.65□□□□□ -0.07
SKP1P63208 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 PAUPAR-201ENST00000630360 2965 ntBASIC14.64□□□□□ -0.07
SKP1P63208 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.64□□□□□ -0.07
SKP1P63208 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SKP1P63208 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 DGCR5-201ENST00000399539 862 ntBASIC14.64□□□□□ -0.07
SKP1P63208 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 KRT17P7-201ENST00000451704 1104 ntBASIC14.64□□□□□ -0.07
SKP1P63208 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.64□□□□□ -0.07
SKP1P63208 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.64□□□□□ -0.07
SKP1P63208 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 BX539320.1-201ENST00000623759 877 ntBASIC14.64□□□□□ -0.07
SKP1P63208 CU634019.7-201ENST00000624153 1185 ntBASIC14.64□□□□□ -0.07
SKP1P63208 FP236241.2-201ENST00000624906 1185 ntBASIC14.64□□□□□ -0.07
SKP1P63208 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SKP1P63208 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.64□□□□□ -0.07
SKP1P63208 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SKP1P63208 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
SKP1P63208 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 AC105917.1-201ENST00000506637 2539 ntBASIC14.63□□□□□ -0.07
SKP1P63208 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SKP1P63208 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 AL138799.1-201ENST00000448213 1675 ntBASIC14.63□□□□□ -0.07
SKP1P63208 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.63□□□□□ -0.07
SKP1P63208 AC098850.1-201ENST00000419919 790 ntBASIC14.63□□□□□ -0.07
SKP1P63208 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.63□□□□□ -0.07
SKP1P63208 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.63□□□□□ -0.07
SKP1P63208 CR383656.12-201ENST00000549567 513 ntBASIC14.63□□□□□ -0.07
SKP1P63208 AC005225.4-201ENST00000557330 545 ntBASIC14.63□□□□□ -0.07
SKP1P63208 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 AL359711.2-201ENST00000563105 872 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms