Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.95□□□□□ -0.66
RPL39P62891 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RPL39P62891 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
RPL39P62891 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.95□□□□□ -0.66
RPL39P62891 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
RPL39P62891 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RPL39P62891 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.95□□□□□ -0.66
RPL39P62891 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RPL39P62891 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.95□□□□□ -0.66
RPL39P62891 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPL39P62891 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RPL39P62891 CYP4F24P-201ENST00000586049 1580 ntBASIC10.94□□□□□ -0.66
RPL39P62891 FOXO1B-201ENST00000504678 1527 ntBASIC10.94□□□□□ -0.66
RPL39P62891 AP000845.1-201ENST00000581677 2131 ntBASIC10.94□□□□□ -0.66
RPL39P62891 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 BEND3P1-201ENST00000421591 1944 ntBASIC10.94□□□□□ -0.66
RPL39P62891 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.94□□□□□ -0.66
RPL39P62891 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 RPL5P21-201ENST00000404620 815 ntBASIC10.94□□□□□ -0.66
RPL39P62891 KRT18P67-201ENST00000432816 1264 ntBASIC10.94□□□□□ -0.66
RPL39P62891 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 FAM210CP-201ENST00000445714 574 ntBASIC10.94□□□□□ -0.66
RPL39P62891 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.94□□□□□ -0.66
RPL39P62891 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 KRT18P35-201ENST00000510488 1269 ntBASIC10.94□□□□□ -0.66
RPL39P62891 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 UNC93B6-202ENST00000528242 690 ntBASIC10.94□□□□□ -0.66
RPL39P62891 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.94□□□□□ -0.66
RPL39P62891 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.94□□□□□ -0.66
RPL39P62891 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.94□□□□□ -0.66
RPL39P62891 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.94□□□□□ -0.66
RPL39P62891 AC073389.1-201ENST00000595595 795 ntBASIC10.94□□□□□ -0.66
RPL39P62891 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.94□□□□□ -0.66
RPL39P62891 AC097359.3-201ENST00000603982 1210 ntBASIC10.94□□□□□ -0.66
RPL39P62891 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 FAM215A-202ENST00000632077 792 ntBASIC10.94□□□□□ -0.66
RPL39P62891 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 AC084364.1-201ENST00000551967 1556 ntBASIC10.94□□□□□ -0.66
RPL39P62891 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.94□□□□□ -0.66
RPL39P62891 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RPL39P62891 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPL39P62891 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RPL39P62891 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPL39P62891 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RPL39P62891 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms