Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SEC61A1P61619 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.59□□□□□ -0.23
SEC61A1P61619 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SEC61A1P61619 BCRP1-201ENST00000444246 691 ntBASIC13.59□□□□□ -0.23
SEC61A1P61619 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.59□□□□□ -0.23
SEC61A1P61619 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.59□□□□□ -0.23
SEC61A1P61619 AC098859.1-201ENST00000502915 1238 ntBASIC13.59□□□□□ -0.23
SEC61A1P61619 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.59□□□□□ -0.23
SEC61A1P61619 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.59□□□□□ -0.23
SEC61A1P61619 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.59□□□□□ -0.23
SEC61A1P61619 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.59□□□□□ -0.23
SEC61A1P61619 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.59□□□□□ -0.23
SEC61A1P61619 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SEC61A1P61619 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SEC61A1P61619 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.59□□□□□ -0.23
SEC61A1P61619 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SEC61A1P61619 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.58□□□□□ -0.23
SEC61A1P61619 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SEC61A1P61619 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SEC61A1P61619 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.23
SEC61A1P61619 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SEC61A1P61619 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
SEC61A1P61619 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SEC61A1P61619 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.58□□□□□ -0.23
SEC61A1P61619 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SEC61A1P61619 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.58□□□□□ -0.23
SEC61A1P61619 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 FAM220BP-201ENST00000377689 816 ntBASIC13.58□□□□□ -0.24
SEC61A1P61619 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 AC069120.2-201ENST00000524091 540 ntBASIC13.58□□□□□ -0.24
SEC61A1P61619 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.58□□□□□ -0.24
SEC61A1P61619 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.58□□□□□ -0.24
SEC61A1P61619 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SEC61A1P61619 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 AGAP7P-201ENST00000582299 2062 ntBASIC13.58□□□□□ -0.24
SEC61A1P61619 AGAP14-201ENST00000624701 2060 ntBASIC13.58□□□□□ -0.24
SEC61A1P61619 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.58□□□□□ -0.24
SEC61A1P61619 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SEC61A1P61619 MROH4P-201ENST00000431302 1578 ntBASIC13.58□□□□□ -0.24
SEC61A1P61619 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms