Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RAB5BP61020 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 AC107375.1-201ENST00000564464 2231 ntBASIC12.06□□□□□ -0.48
RAB5BP61020 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RAB5BP61020 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RAB5BP61020 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RAB5BP61020 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RAB5BP61020 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.06□□□□□ -0.48
RAB5BP61020 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RAB5BP61020 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB5BP61020 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RAB5BP61020 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 AC010460.3-201ENST00000511359 1579 ntBASIC12.05□□□□□ -0.48
RAB5BP61020 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RAB5BP61020 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB5BP61020 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 KRT8P22-201ENST00000562317 1415 ntBASIC12.05□□□□□ -0.48
RAB5BP61020 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.05□□□□□ -0.48
RAB5BP61020 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 ESRRAP1-201ENST00000400596 1257 ntBASIC12.05□□□□□ -0.48
RAB5BP61020 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
RAB5BP61020 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 AC026366.1-201ENST00000488803 879 ntBASIC12.05□□□□□ -0.48
RAB5BP61020 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.05□□□□□ -0.48
RAB5BP61020 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 STK25P1-201ENST00000585406 838 ntBASIC12.05□□□□□ -0.48
RAB5BP61020 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RAB5BP61020 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RAB5BP61020 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RAB5BP61020 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
RAB5BP61020 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RAB5BP61020 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RAB5BP61020 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RAB5BP61020 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB5BP61020 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AL355802.2-201ENST00000402069 882 ntBASIC12.04□□□□□ -0.48
RAB5BP61020 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms