Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDL3P58872 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDL3P58872 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 AC016700.1-201ENST00000429424 312 ntBASIC17.96■□□□□ 0.47
RHBDL3P58872 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.96■□□□□ 0.47
RHBDL3P58872 SERPINA13P-202ENST00000478994 924 ntBASIC17.96■□□□□ 0.47
RHBDL3P58872 AC020914.3-201ENST00000594712 304 ntBASIC17.96■□□□□ 0.47
RHBDL3P58872 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RHBDL3P58872 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.96■□□□□ 0.47
RHBDL3P58872 AC007950.2-201ENST00000615045 2347 ntBASIC17.96■□□□□ 0.47
RHBDL3P58872 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RHBDL3P58872 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RHBDL3P58872 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RHBDL3P58872 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RHBDL3P58872 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDL3P58872 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDL3P58872 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 AC023024.2-201ENST00000623561 1993 ntBASIC17.95■□□□□ 0.46
RHBDL3P58872 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 LILRP1-201ENST00000444199 1370 ntBASIC17.95■□□□□ 0.46
RHBDL3P58872 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.95■□□□□ 0.46
RHBDL3P58872 AC005077.2-201ENST00000449786 690 ntBASIC17.95■□□□□ 0.46
RHBDL3P58872 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.95■□□□□ 0.46
RHBDL3P58872 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDL3P58872 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.95■□□□□ 0.46
RHBDL3P58872 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RHBDL3P58872 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDL3P58872 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RHBDL3P58872 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDL3P58872 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 AL138725.1-201ENST00000407347 1314 ntBASIC17.95■□□□□ 0.46
RHBDL3P58872 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RHBDL3P58872 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RHBDL3P58872 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RHBDL3P58872 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.95■□□□□ 0.46
RHBDL3P58872 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RHBDL3P58872 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDL3P58872 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 REXO1L2P-201ENST00000425429 2069 ntBASIC17.94■□□□□ 0.46
RHBDL3P58872 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDL3P58872 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDL3P58872 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.94■□□□□ 0.46
RHBDL3P58872 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDL3P58872 IGHJ2P-201ENST00000454480 60 ntBASIC17.94■□□□□ 0.46
RHBDL3P58872 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDL3P58872 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDL3P58872 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.94■□□□□ 0.46
RHBDL3P58872 AC084346.2-201ENST00000607097 949 ntBASIC17.94■□□□□ 0.46
RHBDL3P58872 AL021578.1-201ENST00000613646 709 ntBASIC17.94■□□□□ 0.46
RHBDL3P58872 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.94■□□□□ 0.46
RHBDL3P58872 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.94■□□□□ 0.46
RHBDL3P58872 MROH4P-201ENST00000431302 1578 ntBASIC17.94■□□□□ 0.46
RHBDL3P58872 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RHBDL3P58872 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RHBDL3P58872 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.93■□□□□ 0.46
RHBDL3P58872 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RHBDL3P58872 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms