Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SPDYE14P-201ENST00000442619 822 ntBASIC14.42□□□□□ -0.1
CDH12P55289 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH12P55289 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH12P55289 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH12P55289 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDH12P55289 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH12P55289 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH12P55289 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH12P55289 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDH12P55289 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDH12P55289 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 AC084364.1-201ENST00000551967 1556 ntBASIC14.42□□□□□ -0.1
CDH12P55289 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH12P55289 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH12P55289 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CDH12P55289 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH12P55289 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH12P55289 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH12P55289 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH12P55289 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 BX842568.4-201ENST00000421222 227 ntBASIC14.41□□□□□ -0.1
CDH12P55289 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH12P55289 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 AC026150.2-201ENST00000564693 1156 ntBASIC14.41□□□□□ -0.1
CDH12P55289 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.41□□□□□ -0.1
CDH12P55289 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH12P55289 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH12P55289 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH12P55289 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CDH12P55289 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.4□□□□□ -0.1
CDH12P55289 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH12P55289 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH12P55289 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH12P55289 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDH12P55289 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH12P55289 SPDYE17-201ENST00000412399 783 ntBASIC14.4□□□□□ -0.1
CDH12P55289 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH12P55289 UPF3AP3-201ENST00000420996 769 ntBASIC14.4□□□□□ -0.1
CDH12P55289 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms