Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNA3P52797 KLF2P2-201ENST00000416807 1039 ntBASIC14.38□□□□□ -0.11
EFNA3P52797 AC234783.1-201ENST00000441761 496 ntBASIC14.38□□□□□ -0.11
EFNA3P52797 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.38□□□□□ -0.11
EFNA3P52797 CTBP2P5-201ENST00000454986 1264 ntBASIC14.38□□□□□ -0.11
EFNA3P52797 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.38□□□□□ -0.11
EFNA3P52797 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNA3P52797 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.38□□□□□ -0.11
EFNA3P52797 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EFNA3P52797 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.38□□□□□ -0.11
EFNA3P52797 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNA3P52797 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNA3P52797 COX11-210ENST00000639671 696 ntBASIC14.38□□□□□ -0.11
EFNA3P52797 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.38□□□□□ -0.11
EFNA3P52797 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EFNA3P52797 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
EFNA3P52797 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EFNA3P52797 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 NORAD-201ENST00000565493 5339 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
EFNA3P52797 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.37□□□□□ -0.11
EFNA3P52797 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 AC105917.1-201ENST00000506637 2539 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 AC099336.1-201ENST00000417053 1171 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 AL355864.2-201ENST00000447420 863 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 BNIP3P42-201ENST00000454982 569 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 AC007551.1-201ENST00000457394 519 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 KRT90P-201ENST00000549264 1064 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.37□□□□□ -0.11
EFNA3P52797 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 SAMD11P1-201ENST00000571429 661 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 BNIP3P29-201ENST00000598302 571 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 AC145423.3-201ENST00000615987 467 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 AC011447.5-201ENST00000616168 564 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 AL645728.2-202ENST00000641679 227 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.37□□□□□ -0.11
EFNA3P52797 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.37□□□□□ -0.11
EFNA3P52797 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
EFNA3P52797 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
EFNA3P52797 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 PPT1-215ENST00000641471 2368 ntBASIC14.37□□□□□ -0.11
EFNA3P52797 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EFNA3P52797 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 AL157414.3-201ENST00000624276 1954 ntBASIC14.36□□□□□ -0.11
EFNA3P52797 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.36□□□□□ -0.11
EFNA3P52797 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EFNA3P52797 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms