Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CXCL5P42830 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.47□□□□□ -0.73
CXCL5P42830 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.46□□□□□ -0.73
CXCL5P42830 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CXCL5P42830 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.46□□□□□ -0.73
CXCL5P42830 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
CXCL5P42830 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
CXCL5P42830 AC004870.1-201ENST00000315132 882 ntBASIC10.46□□□□□ -0.73
CXCL5P42830 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 HLA-H-201ENST00000383620 1096 ntBASIC10.46□□□□□ -0.73
CXCL5P42830 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.46□□□□□ -0.73
CXCL5P42830 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.46□□□□□ -0.73
CXCL5P42830 FAAHP1-202ENST00000446499 1238 ntBASIC10.46□□□□□ -0.73
CXCL5P42830 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.46□□□□□ -0.73
CXCL5P42830 RN7SL589P-201ENST00000481268 310 ntBASIC10.46□□□□□ -0.73
CXCL5P42830 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.46□□□□□ -0.73
CXCL5P42830 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.46□□□□□ -0.73
CXCL5P42830 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.46□□□□□ -0.73
CXCL5P42830 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CXCL5P42830 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
CXCL5P42830 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.46□□□□□ -0.73
CXCL5P42830 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.46□□□□□ -0.73
CXCL5P42830 AC004877.2-201ENST00000623941 599 ntBASIC10.46□□□□□ -0.73
CXCL5P42830 AC008267.7-201ENST00000624570 1194 ntBASIC10.46□□□□□ -0.73
CXCL5P42830 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.46□□□□□ -0.74
CXCL5P42830 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.46□□□□□ -0.74
CXCL5P42830 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.46□□□□□ -0.74
CXCL5P42830 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.46□□□□□ -0.74
CXCL5P42830 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.46□□□□□ -0.74
CXCL5P42830 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 AC091951.1-201ENST00000512854 2465 ntBASIC10.46□□□□□ -0.74
CXCL5P42830 AC018892.3-201ENST00000623986 2499 ntBASIC10.46□□□□□ -0.74
CXCL5P42830 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
CXCL5P42830 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.46□□□□□ -0.74
CXCL5P42830 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CXCL5P42830 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CXCL5P42830 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CXCL5P42830 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.45□□□□□ -0.74
CXCL5P42830 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.45□□□□□ -0.74
CXCL5P42830 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.45□□□□□ -0.74
CXCL5P42830 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CXCL5P42830 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms