Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.64■□□□□ 0.09
HADHAP40939 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.64■□□□□ 0.09
HADHAP40939 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
HADHAP40939 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.64■□□□□ 0.09
HADHAP40939 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 SBF1P1-201ENST00000444527 5631 ntBASIC15.64■□□□□ 0.09
HADHAP40939 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.64■□□□□ 0.09
HADHAP40939 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HADHAP40939 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HADHAP40939 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HADHAP40939 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HADHAP40939 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.63■□□□□ 0.09
HADHAP40939 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 AC084364.1-201ENST00000551967 1556 ntBASIC15.63■□□□□ 0.09
HADHAP40939 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.63■□□□□ 0.09
HADHAP40939 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 BCRP1-201ENST00000444246 691 ntBASIC15.63■□□□□ 0.09
HADHAP40939 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 AC135586.1-201ENST00000539323 574 ntBASIC15.63■□□□□ 0.09
HADHAP40939 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 CICP24-201ENST00000605464 2705 ntBASIC15.63■□□□□ 0.09
HADHAP40939 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.63■□□□□ 0.09
HADHAP40939 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HADHAP40939 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
HADHAP40939 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.62■□□□□ 0.09
HADHAP40939 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
HADHAP40939 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
HADHAP40939 AC008738.7-201ENST00000609744 511 ntBASIC15.62■□□□□ 0.09
HADHAP40939 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 CICP23-201ENST00000605013 2741 ntBASIC15.62■□□□□ 0.09
HADHAP40939 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HADHAP40939 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HADHAP40939 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HADHAP40939 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms