Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.31□□□□□ -0.12
LCN1P31025 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 RPL13AP25-201ENST00000484130 612 ntBASIC14.31□□□□□ -0.12
LCN1P31025 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.31□□□□□ -0.12
LCN1P31025 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.31□□□□□ -0.12
LCN1P31025 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LCN1P31025 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.31□□□□□ -0.12
LCN1P31025 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LCN1P31025 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
LCN1P31025 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LCN1P31025 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P31025 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 CICP4-201ENST00000447359 2812 ntBASIC14.3□□□□□ -0.12
LCN1P31025 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P31025 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P31025 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 AC104457.1-201ENST00000401024 814 ntBASIC14.3□□□□□ -0.12
LCN1P31025 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.3□□□□□ -0.12
LCN1P31025 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.3□□□□□ -0.12
LCN1P31025 TPRX2P-201ENST00000535362 881 ntBASIC14.3□□□□□ -0.12
LCN1P31025 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
LCN1P31025 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
LCN1P31025 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 AC025181.2-201ENST00000606994 802 ntBASIC14.3□□□□□ -0.12
LCN1P31025 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.3□□□□□ -0.12
LCN1P31025 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
LCN1P31025 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 AL391825.1-201ENST00000457671 1364 ntBASIC14.3□□□□□ -0.12
LCN1P31025 AC023157.3-201ENST00000619086 2088 ntBASIC14.3□□□□□ -0.12
LCN1P31025 MYO15B-237ENST00000642007 4893 ntBASIC14.3□□□□□ -0.12
LCN1P31025 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P31025 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 PPT1-215ENST00000641471 2368 ntBASIC14.3□□□□□ -0.12
LCN1P31025 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.3□□□□□ -0.12
LCN1P31025 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LCN1P31025 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P31025 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P31025 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.29□□□□□ -0.12
LCN1P31025 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
LCN1P31025 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P31025 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P31025 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P31025 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LCN1P31025 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P31025 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.29□□□□□ -0.12
LCN1P31025 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P31025 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms