Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL4A5P29400 OR2R1P-201ENST00000441404 914 ntBASIC17.97■□□□□ 0.47
COL4A5P29400 FTH1P22-201ENST00000456305 520 ntBASIC17.97■□□□□ 0.47
COL4A5P29400 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A5P29400 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A5P29400 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A5P29400 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.97■□□□□ 0.47
COL4A5P29400 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL4A5P29400 MIR6769A-201ENST00000617340 73 ntBASIC17.97■□□□□ 0.47
COL4A5P29400 AC133540.1-201ENST00000620845 1019 ntBASIC17.97■□□□□ 0.47
COL4A5P29400 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL4A5P29400 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL4A5P29400 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A5P29400 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
COL4A5P29400 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
COL4A5P29400 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
COL4A5P29400 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL4A5P29400 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL4A5P29400 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.97■□□□□ 0.47
COL4A5P29400 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.97■□□□□ 0.47
COL4A5P29400 REXO1L2P-201ENST00000425429 2069 ntBASIC17.97■□□□□ 0.47
COL4A5P29400 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.96■□□□□ 0.47
COL4A5P29400 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.96■□□□□ 0.47
COL4A5P29400 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.96■□□□□ 0.47
COL4A5P29400 LYPLA2P1-203ENST00000447689 696 ntBASIC17.96■□□□□ 0.47
COL4A5P29400 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL4A5P29400 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
COL4A5P29400 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A5P29400 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.96■□□□□ 0.47
COL4A5P29400 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.96■□□□□ 0.47
COL4A5P29400 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.96■□□□□ 0.47
COL4A5P29400 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL4A5P29400 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.96■□□□□ 0.47
COL4A5P29400 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.96■□□□□ 0.47
COL4A5P29400 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL4A5P29400 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL4A5P29400 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 XBP1P1-201ENST00000436573 652 ntBASIC17.96■□□□□ 0.47
COL4A5P29400 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 CHCHD2P9-201ENST00000461726 456 ntBASIC17.96■□□□□ 0.47
COL4A5P29400 GCOM2-201ENST00000509133 1104 ntBASIC17.96■□□□□ 0.47
COL4A5P29400 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL4A5P29400 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.96■□□□□ 0.47
COL4A5P29400 SIGLEC18P-201ENST00000602271 909 ntBASIC17.96■□□□□ 0.47
COL4A5P29400 AC090502.4-201ENST00000551714 1386 ntBASIC17.96■□□□□ 0.47
COL4A5P29400 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL4A5P29400 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.96■□□□□ 0.46
COL4A5P29400 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A5P29400 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.95■□□□□ 0.46
COL4A5P29400 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A5P29400 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.95■□□□□ 0.46
COL4A5P29400 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL4A5P29400 DUTP3-201ENST00000450025 415 ntBASIC17.95■□□□□ 0.46
COL4A5P29400 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.95■□□□□ 0.46
COL4A5P29400 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.95■□□□□ 0.46
COL4A5P29400 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL4A5P29400 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.95■□□□□ 0.46
COL4A5P29400 LINC01783-202ENST00000614408 828 ntBASIC17.95■□□□□ 0.46
COL4A5P29400 BX284668.2-205ENST00000619677 828 ntBASIC17.95■□□□□ 0.46
COL4A5P29400 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL4A5P29400 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.95■□□□□ 0.46
COL4A5P29400 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
COL4A5P29400 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL4A5P29400 TMBIM7P-202ENST00000641474 1516 ntBASIC17.95■□□□□ 0.46
COL4A5P29400 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms