Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 AC104457.1-201ENST00000401024 814 ntBASIC14.19□□□□□ -0.14
ABCD3P28288 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
ABCD3P28288 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 RN7SL837P-201ENST00000463010 287 ntBASIC14.19□□□□□ -0.14
ABCD3P28288 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ABCD3P28288 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.19□□□□□ -0.14
ABCD3P28288 SAMD11P1-201ENST00000571429 661 ntBASIC14.19□□□□□ -0.14
ABCD3P28288 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 AC126177.1-201ENST00000547829 2218 ntBASIC14.19□□□□□ -0.14
ABCD3P28288 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.19□□□□□ -0.14
ABCD3P28288 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ABCD3P28288 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ABCD3P28288 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 AL512384.1-201ENST00000406683 331 ntBASIC14.18□□□□□ -0.14
ABCD3P28288 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
ABCD3P28288 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.18□□□□□ -0.14
ABCD3P28288 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 AP001582.1-201ENST00000525856 295 ntBASIC14.18□□□□□ -0.14
ABCD3P28288 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.18□□□□□ -0.14
ABCD3P28288 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.18□□□□□ -0.14
ABCD3P28288 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.18□□□□□ -0.14
ABCD3P28288 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ABCD3P28288 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.18□□□□□ -0.14
ABCD3P28288 AC005252.2-201ENST00000624630 1141 ntBASIC14.18□□□□□ -0.14
ABCD3P28288 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ABCD3P28288 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 FLJ16779-201ENST00000612722 7638 ntBASIC14.18□□□□□ -0.14
ABCD3P28288 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ABCD3P28288 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ABCD3P28288 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms