Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO1P25800 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO1P25800 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.95□□□□□ -0.34
LMO1P25800 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO1P25800 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.95□□□□□ -0.34
LMO1P25800 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.95□□□□□ -0.34
LMO1P25800 IGHV3-42-201ENST00000520410 361 ntBASIC12.95□□□□□ -0.34
LMO1P25800 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO1P25800 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
LMO1P25800 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO1P25800 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 AL391069.4-201ENST00000609583 481 ntBASIC12.95□□□□□ -0.34
LMO1P25800 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.95□□□□□ -0.34
LMO1P25800 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 FER1L4-210ENST00000615531 5998 ntBASIC12.95□□□□□ -0.34
LMO1P25800 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.94□□□□□ -0.34
LMO1P25800 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 REXO1L2P-201ENST00000425429 2069 ntBASIC12.94□□□□□ -0.34
LMO1P25800 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
LMO1P25800 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 MIR770-201ENST00000390219 98 ntBASIC12.94□□□□□ -0.34
LMO1P25800 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 SRD5A3P1-201ENST00000603021 949 ntBASIC12.94□□□□□ -0.34
LMO1P25800 AC106028.4-201ENST00000614509 607 ntBASIC12.94□□□□□ -0.34
LMO1P25800 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 AC022144.1-201ENST00000602255 1580 ntBASIC12.94□□□□□ -0.34
LMO1P25800 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO1P25800 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.94□□□□□ -0.34
LMO1P25800 AJ011931.1-201ENST00000618749 2492 ntBASIC12.94□□□□□ -0.34
LMO1P25800 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO1P25800 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LMO1P25800 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms