Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN3P20807 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.89□□□□□ -0.03
CAPN3P20807 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.89□□□□□ -0.03
CAPN3P20807 AC079140.1-201ENST00000508039 487 ntBASIC14.89□□□□□ -0.03
CAPN3P20807 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN3P20807 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN3P20807 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 AC026120.1-201ENST00000611536 926 ntBASIC14.89□□□□□ -0.03
CAPN3P20807 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.89□□□□□ -0.03
CAPN3P20807 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CAPN3P20807 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CAPN3P20807 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CAPN3P20807 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CAPN3P20807 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CAPN3P20807 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 GHSR-202ENST00000427970 912 ntBASIC14.88□□□□□ -0.03
CAPN3P20807 AC005237.2-201ENST00000434368 219 ntBASIC14.88□□□□□ -0.03
CAPN3P20807 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN3P20807 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 AC069335.1-201ENST00000489972 472 ntBASIC14.88□□□□□ -0.03
CAPN3P20807 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.88□□□□□ -0.03
CAPN3P20807 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 AC051619.7-201ENST00000568314 623 ntBASIC14.88□□□□□ -0.03
CAPN3P20807 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.88□□□□□ -0.03
CAPN3P20807 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.88□□□□□ -0.03
CAPN3P20807 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN3P20807 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.88□□□□□ -0.03
CAPN3P20807 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN3P20807 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 INTS4P1-203ENST00000641008 3683 ntBASIC14.88□□□□□ -0.03
CAPN3P20807 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 BX640514.1-201ENST00000583223 1918 ntBASIC14.88□□□□□ -0.03
CAPN3P20807 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CAPN3P20807 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.88□□□□□ -0.03
CAPN3P20807 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CAPN3P20807 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CAPN3P20807 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.87□□□□□ -0.03
CAPN3P20807 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CAPN3P20807 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CAPN3P20807 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CAPN3P20807 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CAPN3P20807 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CAPN3P20807 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms