Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 AC148477.4-201ENST00000613430 1793 ntBASIC14.07□□□□□ -0.16
CD53P19397 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 AC127383.1-201ENST00000444697 1800 ntBASIC14.07□□□□□ -0.16
CD53P19397 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD53P19397 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CD53P19397 RPL37AP1-201ENST00000412502 279 ntBASIC14.07□□□□□ -0.16
CD53P19397 MTND6P24-201ENST00000440466 518 ntBASIC14.07□□□□□ -0.16
CD53P19397 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CD53P19397 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CD53P19397 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 RN7SL828P-201ENST00000607615 303 ntBASIC14.07□□□□□ -0.16
CD53P19397 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.07□□□□□ -0.16
CD53P19397 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.07□□□□□ -0.16
CD53P19397 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.07□□□□□ -0.16
CD53P19397 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.07□□□□□ -0.16
CD53P19397 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.07□□□□□ -0.16
CD53P19397 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.07□□□□□ -0.16
CD53P19397 AC004840.1-201ENST00000636359 365 ntBASIC14.07□□□□□ -0.16
CD53P19397 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CD53P19397 ZBED1P1-201ENST00000502364 1930 ntBASIC14.07□□□□□ -0.16
CD53P19397 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 AL137784.3-201ENST00000623858 2288 ntBASIC14.07□□□□□ -0.16
CD53P19397 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD53P19397 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD53P19397 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CD53P19397 AL161772.1-201ENST00000610494 4412 ntBASIC14.06□□□□□ -0.16
CD53P19397 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 LINC00552-201ENST00000625151 2579 ntBASIC14.06□□□□□ -0.16
CD53P19397 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 FAM220BP-201ENST00000377689 816 ntBASIC14.06□□□□□ -0.16
CD53P19397 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.06□□□□□ -0.16
CD53P19397 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CD53P19397 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.06□□□□□ -0.16
CD53P19397 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 GIMAP3P-201ENST00000495150 836 ntBASIC14.06□□□□□ -0.16
CD53P19397 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CD53P19397 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 HILS1-202ENST00000545329 423 ntBASIC14.06□□□□□ -0.16
CD53P19397 AC243562.2-201ENST00000561247 970 ntBASIC14.06□□□□□ -0.16
CD53P19397 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.06□□□□□ -0.16
CD53P19397 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.06□□□□□ -0.16
CD53P19397 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD53P19397 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms