Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 RNA5SP421-201ENST00000516864 134 ntBASIC13.83□□□□□ -0.2
HLA-DOBP13765 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DOBP13765 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 AP000845.1-201ENST00000581677 2131 ntBASIC13.82□□□□□ -0.2
HLA-DOBP13765 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 CICP24-201ENST00000605464 2705 ntBASIC13.82□□□□□ -0.2
HLA-DOBP13765 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 GHSR-202ENST00000427970 912 ntBASIC13.82□□□□□ -0.2
HLA-DOBP13765 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 TPRX2P-201ENST00000535362 881 ntBASIC13.82□□□□□ -0.2
HLA-DOBP13765 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DOBP13765 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DOBP13765 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DOBP13765 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DOBP13765 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DOBP13765 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DOBP13765 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DOBP13765 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DOBP13765 REXO1L2P-201ENST00000425429 2069 ntBASIC13.81□□□□□ -0.2
HLA-DOBP13765 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HLA-DOBP13765 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DOBP13765 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DOBP13765 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HLA-DOBP13765 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.81□□□□□ -0.2
HLA-DOBP13765 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms