Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPRFP10586 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPRFP10586 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPRFP10586 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPRFP10586 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
PTPRFP10586 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 AC078991.1-201ENST00000437297 610 ntBASIC17.24■□□□□ 0.35
PTPRFP10586 OR2R1P-201ENST00000441404 914 ntBASIC17.24■□□□□ 0.35
PTPRFP10586 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPRFP10586 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.24■□□□□ 0.35
PTPRFP10586 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPRFP10586 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPRFP10586 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTPRFP10586 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPRFP10586 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPRFP10586 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPRFP10586 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPRFP10586 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 MIR4750-201ENST00000584564 56 ntBASIC17.23■□□□□ 0.35
PTPRFP10586 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PTPRFP10586 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 KRT8P31-201ENST00000504812 1408 ntBASIC17.23■□□□□ 0.35
PTPRFP10586 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 AP005117.1-202ENST00000581724 1908 ntBASIC17.23■□□□□ 0.35
PTPRFP10586 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPRFP10586 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 RBM8B-201ENST00000555532 525 ntBASIC17.23■□□□□ 0.35
PTPRFP10586 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.23■□□□□ 0.35
PTPRFP10586 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.23■□□□□ 0.35
PTPRFP10586 MIR3147-201ENST00000577811 66 ntBASIC17.23■□□□□ 0.35
PTPRFP10586 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.23■□□□□ 0.35
PTPRFP10586 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPRFP10586 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms