Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.58□□□□□ -0.24
UBCP0CG48 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 CEND1P1-201ENST00000451006 455 ntBASIC13.58□□□□□ -0.24
UBCP0CG48 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
UBCP0CG48 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.58□□□□□ -0.24
UBCP0CG48 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.58□□□□□ -0.24
UBCP0CG48 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.58□□□□□ -0.24
UBCP0CG48 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.58□□□□□ -0.24
UBCP0CG48 AC003101.2-201ENST00000612557 442 ntBASIC13.58□□□□□ -0.24
UBCP0CG48 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
UBCP0CG48 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
UBCP0CG48 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 AL359183.1-201ENST00000623796 2132 ntBASIC13.57□□□□□ -0.24
UBCP0CG48 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 AC041040.2-201ENST00000622926 2899 ntBASIC13.57□□□□□ -0.24
UBCP0CG48 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 AL627223.1-201ENST00000416693 442 ntBASIC13.57□□□□□ -0.24
UBCP0CG48 TARDBPP1-201ENST00000442013 1203 ntBASIC13.57□□□□□ -0.24
UBCP0CG48 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 SLED1-202ENST00000512051 380 ntBASIC13.57□□□□□ -0.24
UBCP0CG48 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
UBCP0CG48 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 AL513210.1-201ENST00000629608 234 ntBASIC13.57□□□□□ -0.24
UBCP0CG48 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
UBCP0CG48 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBCP0CG48 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.57□□□□□ -0.24
UBCP0CG48 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.56□□□□□ -0.24
UBCP0CG48 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
UBCP0CG48 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.56□□□□□ -0.24
UBCP0CG48 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBCP0CG48 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms