Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.44■□□□□ 0.06
MMP2P08253 AL139094.1-201ENST00000405549 1188 ntBASIC15.44■□□□□ 0.06
MMP2P08253 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.44■□□□□ 0.06
MMP2P08253 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.44■□□□□ 0.06
MMP2P08253 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.44■□□□□ 0.06
MMP2P08253 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.44■□□□□ 0.06
MMP2P08253 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.44■□□□□ 0.06
MMP2P08253 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.44■□□□□ 0.06
MMP2P08253 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 AL596325.1-201ENST00000563991 1082 ntBASIC15.44■□□□□ 0.06
MMP2P08253 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.44■□□□□ 0.06
MMP2P08253 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
MMP2P08253 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
MMP2P08253 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
MMP2P08253 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 AC011270.2-201ENST00000624293 2550 ntBASIC15.43■□□□□ 0.06
MMP2P08253 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 AL035633.1-201ENST00000406139 838 ntBASIC15.43■□□□□ 0.06
MMP2P08253 AP006294.1-201ENST00000415407 339 ntBASIC15.43■□□□□ 0.06
MMP2P08253 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 NUS1P3-201ENST00000423502 862 ntBASIC15.43■□□□□ 0.06
MMP2P08253 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 AC093433.1-201ENST00000458048 571 ntBASIC15.43■□□□□ 0.06
MMP2P08253 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.43■□□□□ 0.06
MMP2P08253 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.43■□□□□ 0.06
MMP2P08253 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.43■□□□□ 0.06
MMP2P08253 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
MMP2P08253 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MMP2P08253 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MMP2P08253 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 AL137783.1-201ENST00000623494 1896 ntBASIC15.42■□□□□ 0.06
MMP2P08253 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP2P08253 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP2P08253 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 ACKR1-201ENST00000368121 1240 ntBASIC15.42■□□□□ 0.06
MMP2P08253 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP2P08253 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP2P08253 KLF2P2-201ENST00000416807 1039 ntBASIC15.42■□□□□ 0.06
MMP2P08253 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MMP2P08253 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP2P08253 RN7SL692P-201ENST00000464677 288 ntBASIC15.42■□□□□ 0.06
MMP2P08253 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms